recipe bioconductor-bodymaprat

Experimental dataset from the rat BodyMap project

Homepage

https://bioconductor.org/packages/3.10/data/experiment/html/bodymapRat.html

License

CC BY 4.0

Recipe

/bioconductor-bodymaprat/meta.yaml

This package contains a SummarizedExperiment from the Yu et al. (2013) paper that performed the rat BodyMap across 11 organs and 4 developmental stages. Raw FASTQ files were downloaded and mapped using STAR. Data is available on ExperimentHub as a data package.

package bioconductor-bodymaprat

(downloads) docker_bioconductor-bodymaprat

Versions

1.2.0-0, 1.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bodymaprat

and update with:

conda update bioconductor-bodymaprat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bodymaprat:<tag>

(see bioconductor-bodymaprat/tags for valid values for <tag>)