- recipe bioconductor-borealis
Bisulfite-seq OutlieR mEthylation At singLe-sIte reSolution
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/borealis.html
- License:
GPL-3
- Recipe:
Borealis is an R library performing outlier analysis for count-based bisulfite sequencing data. It detectes outlier methylated CpG sites from bisulfite sequencing (BS-seq). The core of Borealis is modeling Beta-Binomial distributions. This can be useful for rare disease diagnoses.
- package bioconductor-borealis¶
-
- Versions:
1.2.0-0
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-bsseq
>=1.34.0,<1.35.0
bioconductor-dss
>=2.46.0,<2.47.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-borealis
and update with:
conda update bioconductor-borealis
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-borealis:<tag>
(see bioconductor-borealis/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-borealis/README.html)