- recipe bioconductor-cancer
A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/canceR.html
- License:
GPL-2
- Recipe:
The package is user friendly interface based on the cgdsr and other modeling packages to explore, compare, and analyse all available Cancer Data (Clinical data, Gene Mutation, Gene Methylation, Gene Expression, Protein Phosphorylation, Copy Number Alteration) hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).
- package bioconductor-cancer¶
-
- Versions:
1.32.0-0
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-genetclassifier
>=1.38.0,<1.39.0
bioconductor-gseabase
>=1.60.0,<1.61.0
bioconductor-phenotest
>=1.46.0,<1.47.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-cancer
and update with:
conda update bioconductor-cancer
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-cancer:<tag>
(see bioconductor-cancer/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-cancer/README.html)