recipe bioconductor-cbaf

Automated functions for comparing various data from cbioportal.org

Homepage

https://bioconductor.org/packages/3.10/bioc/html/cbaf.html

License

Artistic-2.0

Recipe

/bioconductor-cbaf/meta.yaml

This package contains functions that allow analysing and comparing various gene groups from different cancers/cancer subgroups easily. So far, it is compatible with RNA-seq, microRNA-seq, microarray and methylation datasets that are stored on cbioportal.org.

package bioconductor-cbaf

(downloads) docker_bioconductor-cbaf

Versions

1.8.0-0, 1.6.0-1, 1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cbaf

and update with:

conda update bioconductor-cbaf

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cbaf:<tag>

(see bioconductor-cbaf/tags for valid values for <tag>)