recipe bioconductor-ccpromise

PROMISE analysis with Canonical Correlation for Two Forms of High Dimensional Genetic Data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/CCPROMISE.html

License

GPL (>= 2)

Recipe

/bioconductor-ccpromise/meta.yaml

Perform Canonical correlation between two forms of high demensional genetic data, and associate the first compoent of each form of data with a specific biologically interesting pattern of associations with multiple endpoints. A probe level analysis is also implemented.

package bioconductor-ccpromise

Versions

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-gseabase >=1.56.0,<1.57.0

• bioconductor-promise >=1.46.0,<1.47.0

• r-base >=4.1,<4.2.0a0

• r-ccp

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ccpromise

and update with:

conda update bioconductor-ccpromise

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ccpromise:<tag>

(see bioconductor-ccpromise/tags for valid values for <tag>)

Download stats

Link to this page

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