recipe bioconductor-cghbase

CGHbase: Base functions and classes for arrayCGH data analysis.

Homepage

https://bioconductor.org/packages/3.10/bioc/html/CGHbase.html

License

GPL

Recipe

/bioconductor-cghbase/meta.yaml

Links

biotools: cghbase, doi: 10.1016/j.ejmg.2005.10.046

Contains functions and classes that are needed by arrayCGH packages.

package bioconductor-cghbase

Versions

1.46.0-0, 1.44.0-1, 1.42.0-0, 1.40.0-0, 1.38.0-0, 1.36.0-0, 1.32.0-1, 1.32.0-0

Depends

• bioconductor-biobase >=2.46.0,<2.47.0

• bioconductor-marray >=1.64.0,<1.65.0

• r-base >=3.6,<3.7.0a0

Required By

• bioconductor-genebreak

• bioconductor-cghcall

• bioconductor-sigar

• bioconductor-qdnaseq

• bioconductor-plrs

• bioconductor-cghnormaliter

• bioconductor-cghregions

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cghbase

and update with:

conda update bioconductor-cghbase

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cghbase:<tag>

(see bioconductor-cghbase/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-cghbase/README.html)