recipe bioconductor-cghbase

CGHbase: Base functions and classes for arrayCGH data analysis.

Homepage

https://bioconductor.org/packages/3.14/bioc/html/CGHbase.html

License

GPL

Recipe

/bioconductor-cghbase/meta.yaml

Links

biotools: cghbase, doi: 10.1016/j.ejmg.2005.10.046

Contains functions and classes that are needed by arrayCGH packages.

package bioconductor-cghbase

Versions

1.54.0-0,  1.52.0-0,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-0,  1.40.0-0, 

1.54.0-0,  1.52.0-0,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-0,  1.40.0-0,  1.38.0-0,  1.36.0-0,  1.32.0-1,  1.32.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-marray >=1.72.0,<1.73.0

• r-base >=4.1,<4.2.0a0

Required By

• bioconductor-qdnaseq

• bioconductor-cghregions

• bioconductor-genebreak

• bioconductor-cghnormaliter

• bioconductor-cghcall

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cghbase

and update with:

conda update bioconductor-cghbase

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cghbase:<tag>

(see bioconductor-cghbase/tags for valid values for <tag>)

Download stats

Link to this page

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