recipe bioconductor-cghnormaliter

Normalization of array CGH data with imbalanced aberrations.

Homepage

https://bioconductor.org/packages/3.10/bioc/html/CGHnormaliter.html

License

GPL (>= 3)

Recipe

/bioconductor-cghnormaliter/meta.yaml

Links

biotools: cghnormaliter, doi: 10.1186/1471-2164-10-401

Normalization and centralization of array comparative genomic hybridization (aCGH) data. The algorithm uses an iterative procedure that effectively eliminates the influence of imbalanced copy numbers. This leads to a more reliable assessment of copy number alterations (CNAs).

package bioconductor-cghnormaliter

(downloads) docker_bioconductor-cghnormaliter

Versions

1.40.0-0, 1.38.0-1, 1.36.0-0, 1.34.0-0, 1.32.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cghnormaliter

and update with:

conda update bioconductor-cghnormaliter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cghnormaliter:<tag>

(see bioconductor-cghnormaliter/tags for valid values for <tag>)