recipe bioconductor-chipenrich

Gene Set Enrichment For ChIP-seq Peak Data

Homepage

https://bioconductor.org/packages/3.10/bioc/html/chipenrich.html

License

GPL-3

Recipe

/bioconductor-chipenrich/meta.yaml

ChIP-Enrich and Poly-Enrich perform gene set enrichment testing using peaks called from a ChIP-seq experiment. The method empirically corrects for confounding factors such as the length of genes, and the mappability of the sequence surrounding genes.

package bioconductor-chipenrich

(downloads) docker_bioconductor-chipenrich

Versions

2.10.0-1, 2.8.0-1, 2.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-chipenrich

and update with:

conda update bioconductor-chipenrich

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chipenrich:<tag>

(see bioconductor-chipenrich/tags for valid values for <tag>)