recipe bioconductor-chipsim

Simulation of ChIP-seq experiments

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/ChIPsim.html

License:

GPL (>= 2)

Recipe:

/bioconductor-chipsim/meta.yaml

Links:

biotools: chipsim, doi: 10.1038/nmeth.3252

A general framework for the simulation of ChIP-seq data. Although currently focused on nucleosome positioning the package is designed to support different types of experiments.

package bioconductor-chipsim

(downloads) docker_bioconductor-chipsim

Versions:
1.48.0-01.46.0-01.44.0-11.44.0-01.42.0-01.40.0-01.38.0-11.36.0-01.34.0-0

1.48.0-01.46.0-01.44.0-11.44.0-01.42.0-01.40.0-01.38.0-11.36.0-01.34.0-01.32.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chipsim

and update with:

conda update bioconductor-chipsim

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chipsim:<tag>

(see bioconductor-chipsim/tags for valid values for <tag>)

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