recipe bioconductor-chromplot

Global visualization tool of genomic data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/chromPlot.html

License:

GPL (>= 2)

Recipe:

/bioconductor-chromplot/meta.yaml

Links:

biotools: chromplot, doi: 10.1093/bioinformatics/btw137

Package designed to visualize genomic data along the chromosomes, where the vertical chromosomes are sorted by number, with sex chromosomes at the end.

package bioconductor-chromplot

Versions:

1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0, 

1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-0

Depends:

• bioconductor-biomart >=2.54.0,<2.55.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-chromplot

and update with:

conda update bioconductor-chromplot

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chromplot:<tag>

(see bioconductor-chromplot/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-chromplot/README.html)