recipe bioconductor-clonality

Clonality testing

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/Clonality.html

License:

GPL-3

Recipe:

/bioconductor-clonality/meta.yaml

Links:

biotools: clonality, doi: 10.1093/bioinformatics/btr268

Statistical tests for clonality versus independence of tumors from the same patient based on their LOH or genomewide copy number profiles

package bioconductor-clonality

Versions:

1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-1,  1.38.0-0,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0, 

1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-1,  1.38.0-0,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-0,  1.24.0-0

Depends:

• bioconductor-dnacopy >=1.72.0,<1.73.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-clonality

and update with:

conda update bioconductor-clonality

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-clonality:<tag>

(see bioconductor-clonality/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-clonality/README.html)