recipe bioconductor-clustifyr

Classifier for Single-cell RNA-seq Using Cell Clusters

Homepage

https://bioconductor.org/packages/3.11/bioc/html/clustifyr.html

License

MIT + file LICENSE

Recipe

/bioconductor-clustifyr/meta.yaml

Package designed to aid in classifying cells from single-cell RNA sequencing data using external reference data (e.g., bulk RNA-seq, scRNA-seq, microarray, gene lists). A variety of correlation based methods and gene list enrichment methods are provided to assist cell type assignment.

package bioconductor-clustifyr

(downloads) docker_bioconductor-clustifyr

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-clustifyr

and update with:

conda update bioconductor-clustifyr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-clustifyr:<tag>

(see bioconductor-clustifyr/tags for valid values for <tag>)