recipe bioconductor-cnvfilter

Identifies false positives of CNV calling tools by using SNV calls

Homepage

https://bioconductor.org/packages/3.11/bioc/html/CNVfilteR.html

License

Artistic-2.0

Recipe

/bioconductor-cnvfilter/meta.yaml

CNVfilteR identifies those CNVs that can be discarded by using the single nucleotide variant (SNV) calls that are usually obtained in common NGS pipelines.

package bioconductor-cnvfilter

(downloads) docker_bioconductor-cnvfilter

Versions

1.2.0-0, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cnvfilter

and update with:

conda update bioconductor-cnvfilter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cnvfilter:<tag>

(see bioconductor-cnvfilter/tags for valid values for <tag>)