recipe bioconductor-contibait

Using strand inheritance data from multiple single cells from the organism whose genome is to be assembled, contiBAIT can cluster unbridged contigs together into putative chromosomes, and order the contigs within those chromosomes.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/contiBAIT.html

License

BSD_2_clause + file LICENSE

Recipe

/bioconductor-contibait/meta.yaml

Links

biotools: contibait, doi: 10.1093/bioinformatics/btx281

package bioconductor-contibait

(downloads) docker_bioconductor-contibait

Versions

1.10.0-0, 1.8.0-0, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-contibait

and update with:

conda update bioconductor-contibait

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-contibait:<tag>

(see bioconductor-contibait/tags for valid values for <tag>)