recipe bioconductor-cordon

Tool for analysis of codon usage in various unannotated or KEGG/COG annotated DNA sequences. Calculates different measures of CU bias and CU-based predictors of gene expressivity, and performs gene set enrichment analysis for annotated sequences. Implements several methods for visualization of CU and enrichment analysis results.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/coRdon.html

License

Artistic-2.0

Recipe

/bioconductor-cordon/meta.yaml

package bioconductor-cordon

(downloads) docker_bioconductor-cordon

Versions

1.2.0-1, 1.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cordon

and update with:

conda update bioconductor-cordon

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cordon:<tag>

(see bioconductor-cordon/tags for valid values for <tag>)