recipe bioconductor-covrna

Multivariate Analysis of Transcriptomic Data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/covRNA.html

License

GPL (>= 2)

Recipe

/bioconductor-covrna/meta.yaml

Links

biotools: covrna, doi: 10.1038/nmeth.3252

This package provides the analysis methods fourthcorner and RLQ analysis for large-scale transcriptomic data.

package bioconductor-covrna

Versions

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0,  1.6.0-0, 

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-genefilter >=1.76.0,<1.77.0

• r-ade4

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-covrna

and update with:

conda update bioconductor-covrna

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-covrna:<tag>

(see bioconductor-covrna/tags for valid values for <tag>)

Download stats

Link to this page

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