recipe bioconductor-crisprbase

Base functions and classes for CRISPR gRNA design

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/crisprBase.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-crisprbase/meta.yaml

Provides S4 classes for general nucleases, CRISPR nucleases, CRISPR nickases, and base editors.Several CRISPR-specific genome arithmetic functions are implemented to help extract genomic coordinates of spacer and protospacer sequences. Commonly-used CRISPR nuclease objects are provided that can be readily used in other packages. Both DNA- and RNA-targeting nucleases are supported.

package bioconductor-crisprbase

(downloads) docker_bioconductor-crisprbase

Versions:

1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-crisprbase

and update with:

conda update bioconductor-crisprbase

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-crisprbase:<tag>

(see bioconductor-crisprbase/tags for valid values for <tag>)

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