- recipe bioconductor-csdr
Differential gene co-expression
- Homepage:
- License:
GPL-3
- Recipe:
This package contains functionality to run differential gene co-expression across two different conditions. The algorithm is inspired by Voigt et al. 2017 and finds Conserved, Specific and Differentiated genes (hence the name CSD). This package include efficient and variance calculation by bootstrapping and Welford's algorithm.
- package bioconductor-csdr¶
-
- Versions:
1.4.0-0
,1.0.0-2
,1.0.0-1
,1.0.0-0
- Depends:
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-csdr
and update with:
conda update bioconductor-csdr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-csdr:<tag>
(see bioconductor-csdr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-csdr/README.html)