bioconductor-degreport¶
Creation of a HTML report of differential expression analyses of count data. It integrates some of the code mentioned in DESeq2 and edgeR vignettes, and report a ranked list of genes according to the fold changes mean and variability for each selected gene.
| Home | http://bioconductor.org/packages/3.6/bioc/html/DEGreport.html |
| Versions | 1.12.0, 1.14.0, 1.7.2, 1.8.2 |
| License | MIT + file LICENSE |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-degreport |
| Links | biotools: degreport, doi: 10.1038/nmeth.3252 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-degreport
and update with:
conda update bioconductor-degreport
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-degreport.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-degreport/README.html)
