Creation of a HTML report of differential expression analyses of count data. It integrates some of the code mentioned in DESeq2 and edgeR vignettes, and report a ranked list of genes according to the fold changes mean and variability for each selected gene.
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-degreport
and update with:
conda update bioconductor-degreport
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-degreport.