recipe bioconductor-delayeddataframe

Delayed operation on DataFrame using standard DataFrame metaphor

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/DelayedDataFrame.html

License:

GPL-3

Recipe:

/bioconductor-delayeddataframe/meta.yaml

Based on the standard DataFrame metaphor, we are trying to implement the feature of delayed operation on the DelayedDataFrame, with a slot of lazyIndex, which saves the mapping indexes for each column of DelayedDataFrame. Methods like show, validity check, [/[[ subsetting, rbind/cbind are implemented for DelayedDataFrame to be operated around lazyIndex. The listData slot stays untouched until a realization call e.g., DataFrame constructor OR as.list() is invoked.

package bioconductor-delayeddataframe

Versions:

1.14.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-delayedarray >=0.24.0,<0.25.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-variantexperiment

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-delayeddataframe

and update with:

conda update bioconductor-delayeddataframe

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-delayeddataframe:<tag>

(see bioconductor-delayeddataframe/tags for valid values for <tag>)

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