recipe bioconductor-delayedmatrixstats

A port of the ‘matrixStats’ API for use with DelayedMatrix objects from the ‘DelayedArray’ package. High-performing functions operating on rows and columns of DelayedMatrix objects, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). Functions optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/DelayedMatrixStats.html

License

MIT + file LICENSE

Recipe

/bioconductor-delayedmatrixstats/meta.yaml

package bioconductor-delayedmatrixstats

(downloads) docker_bioconductor-delayedmatrixstats

Versions

1.4.0-1, 1.4.0-0, 1.2.0-0

Depends bioconductor-biocparallel

>=1.16.0,<1.17.0

Depends bioconductor-delayedarray

>=0.8.0,<0.9.0

Depends bioconductor-hdf5array

>=1.10.0,<1.11.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-s4vectors

>=0.20.0,<0.21.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-matrix

Depends r-matrixstats

>=0.53.1

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-delayedmatrixstats

and update with:

conda update bioconductor-delayedmatrixstats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-delayedmatrixstats:<tag>

(see bioconductor-delayedmatrixstats/tags for valid values for <tag>)