-
recipe
bioconductor-descan2¶ Integrated peak and differential caller, specifically designed for broad epigenomic signals.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/DEScan2.html
- License
Artistic-2.0
- Recipe
-
package
bioconductor-descan2¶ 
- Versions
1.2.0-0
- Depends bioconductor-biocgenerics
>=0.28.0,<0.29.0
- Depends bioconductor-biocparallel
>=1.16.0,<1.17.0
- Depends bioconductor-chippeakanno
>=3.16.0,<3.17.0
- Depends bioconductor-delayedarray
>=0.8.0,<0.9.0
- Depends bioconductor-genomeinfodb
>=1.18.0,<1.19.0
- Depends bioconductor-genomicalignments
>=1.18.0,<1.19.0
- Depends bioconductor-genomicranges
>=1.34.0,<1.35.0
- Depends bioconductor-iranges
>=2.16.0,<2.17.0
- Depends bioconductor-rtracklayer
>=1.42.0,<1.43.0
- Depends bioconductor-s4vectors
>=0.20.0,<0.21.0
- Depends bioconductor-summarizedexperiment
>=1.12.0,<1.13.0
- Depends libgcc-ng
>=7.3.0
- Depends libstdcxx-ng
>=7.3.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-data.table
- Depends r-glue
- Depends r-plyr
- Depends r-rcpp
>=0.12.13
- Depends r-rcpparmadillo
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-descan2
and update with:
conda update bioconductor-descan2
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-descan2:<tag>
(see bioconductor-descan2/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-descan2/README.html)