- recipe bioconductor-dexma
Differential Expression Meta-Analysis
- Homepage:
- License:
GPL-2
- Recipe:
performing all the steps of gene expression meta-analysis without eliminating those genes that are presented in at least two datasets. It provides the necessary functions to be able to perform the different methods of gene expression meta-analysis. In addition, it contains functions to apply quality controls, download GEO data sets and show graphical representations of the results.
- package bioconductor-dexma¶
-
- Versions:
1.2.0-0
,1.0.0-0
- Depends:
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-dexmadata
>=1.2.0,<1.3.0
bioconductor-geoquery
>=2.62.0,<2.63.0
bioconductor-impute
>=1.68.0,<1.69.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-snpstats
>=1.44.0,<1.45.0
bioconductor-sva
>=3.42.0,<3.43.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-dexma
and update with:
conda update bioconductor-dexma
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-dexma:<tag>
(see bioconductor-dexma/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-dexma/README.html)