- recipe bioconductor-discorhythm
Interactive Workflow for Discovering Rhythmicity in Biological Data
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/DiscoRhythm.html
- License:
GPL-3
- Recipe:
Set of functions for estimation of cyclical characteristics, such as period, phase, amplitude, and statistical significance in large temporal datasets. Supporting functions are available for quality control, dimensionality reduction, spectral analysis, and analysis of experimental replicates. Contains a R Shiny web interface to execute all workflow steps.
- package bioconductor-discorhythm¶
-
- Versions:
1.14.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.0.0-1
- Depends:
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-biocstyle
>=2.26.0,<2.27.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
r-metacycle
>=1.2.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-discorhythm
and update with:
conda update bioconductor-discorhythm
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-discorhythm:<tag>
(see bioconductor-discorhythm/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-discorhythm/README.html)