bioconductor-dnacopy

downloads

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

Home http://bioconductor.org/packages/3.6/bioc/html/DNAcopy.html
Versions 1.44.0, 1.46.0, 1.48.0, 1.50.1, 1.52.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-dnacopy

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dnacopy

and update with:

conda update bioconductor-dnacopy

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-dnacopy.