recipe bioconductor-dss

Dispersion shrinkage for sequencing data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/DSS.html

License:

GPL

Recipe:

/bioconductor-dss/meta.yaml

Links:

biotools: dss

DSS is an R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq). The core of DSS is a new dispersion shrinkage method for estimating the dispersion parameter from Gamma-Poisson or Beta-Binomial distributions.

package bioconductor-dss

(downloads) docker_bioconductor-dss

Versions:
2.46.0-12.46.0-02.42.0-22.42.0-12.42.0-02.40.0-02.38.0-12.38.0-02.36.0-0

2.46.0-12.46.0-02.42.0-22.42.0-12.42.0-02.40.0-02.38.0-12.38.0-02.36.0-02.34.0-02.32.0-12.30.0-02.28.0-02.26.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-dss

and update with:

conda update bioconductor-dss

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dss:<tag>

(see bioconductor-dss/tags for valid values for <tag>)

Download stats