recipe bioconductor-eatonetalchipseq

ChIP-seq data of ORC-binding sites in Yeast excerpted from Eaton et al. 2010

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/EatonEtAlChIPseq.html

License:

Artistic 2.0

Recipe:

/bioconductor-eatonetalchipseq/meta.yaml

ChIP-seq analysis subset from "Conserved nucleosome positioning defines replication origins" (PMID 20351051)

package bioconductor-eatonetalchipseq

Versions:

0.36.0-0,  0.32.0-1,  0.32.0-0,  0.30.0-0,  0.28.0-1,  0.28.0-0,  0.26.0-0,  0.24.0-0,  0.22.0-1, 

0.36.0-0,  0.32.0-1,  0.32.0-0,  0.30.0-0,  0.28.0-1,  0.28.0-0,  0.26.0-0,  0.24.0-0,  0.22.0-1,  0.20.0-0

Depends:

• bioconductor-data-packages >=20221108

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-rtracklayer >=1.58.0,<1.59.0

• bioconductor-shortread >=1.56.0,<1.57.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-eatonetalchipseq

and update with:

conda update bioconductor-eatonetalchipseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-eatonetalchipseq:<tag>

(see bioconductor-eatonetalchipseq/tags for valid values for <tag>)

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