recipe bioconductor-eatonetalchipseq

ChIP-seq data of ORC-binding sites in Yeast excerpted from Eaton et al. 2010

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/EatonEtAlChIPseq.html

License

Artistic 2.0

Recipe

/bioconductor-eatonetalchipseq/meta.yaml

ChIP-seq analysis subset from "Conserved nucleosome positioning defines replication origins" (PMID 20351051)

package bioconductor-eatonetalchipseq

Versions

0.32.0-0,  0.30.0-0,  0.28.0-1,  0.28.0-0,  0.26.0-0,  0.24.0-0,  0.22.0-1,  0.20.0-0

Depends

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-rtracklayer >=1.54.0,<1.55.0

• bioconductor-shortread >=1.52.0,<1.53.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-eatonetalchipseq

and update with:

conda update bioconductor-eatonetalchipseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-eatonetalchipseq:<tag>

(see bioconductor-eatonetalchipseq/tags for valid values for <tag>)

Download stats

Link to this page

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