- recipe bioconductor-egseadata
Gene set collections for the EGSEA package
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/EGSEAdata.html
- License:
file LICENSE
- Recipe:
This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.
- package bioconductor-egseadata¶
-
- Versions:
1.26.0-0
,1.25.0-0
,1.22.0-1
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.18.0-0
,1.17.0-0
,1.16.0-0
,1.26.0-0
,1.25.0-0
,1.22.0-1
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.18.0-0
,1.17.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
- Depends:
bioconductor-data-packages
>=20221111
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-egseadata
and update with:
conda update bioconductor-egseadata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-egseadata:<tag>
(see bioconductor-egseadata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-egseadata/README.html)