recipe bioconductor-egseadata

Gene set collections for the EGSEA package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/EGSEAdata.html

License:

file LICENSE

Recipe:

/bioconductor-egseadata/meta.yaml

This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.

package bioconductor-egseadata

(downloads) docker_bioconductor-egseadata

Versions:
1.26.0-01.25.0-01.22.0-11.22.0-01.20.0-01.18.0-11.18.0-01.17.0-01.16.0-0

1.26.0-01.25.0-01.22.0-11.22.0-01.20.0-01.18.0-11.18.0-01.17.0-01.16.0-01.14.0-01.12.0-11.12.0-01.10.0-01.8.0-01.6.0-11.6.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-egseadata

and update with:

conda update bioconductor-egseadata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-egseadata:<tag>

(see bioconductor-egseadata/tags for valid values for <tag>)

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