recipe bioconductor-enrichedheatmap

Making Enriched Heatmaps

Homepage

https://bioconductor.org/packages/3.14/bioc/html/EnrichedHeatmap.html

License

MIT + file LICENSE

Recipe

/bioconductor-enrichedheatmap/meta.yaml

Enriched heatmap is a special type of heatmap which visualizes the enrichment of genomic signals on specific target regions. Here we implement enriched heatmap by ComplexHeatmap package. Since this type of heatmap is just a normal heatmap but with some special settings, with the functionality of ComplexHeatmap, it would be much easier to customize the heatmap as well as concatenating to a list of heatmaps to show correspondance between different data sources.

package bioconductor-enrichedheatmap

Versions

1.24.0-1,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.2-0,  1.16.0-0,  1.14.0-1,  1.12.0-0

Depends

• bioconductor-complexheatmap >=2.10.0,<2.11.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-iranges >=2.28.0,<2.29.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=10.3.0

• liblapack >=3.8.0,<4.0a0

• libstdcxx-ng >=10.3.0

• r-base >=4.1,<4.2.0a0

• r-circlize >=0.4.5

• r-getoptlong

• r-locfit

• r-matrixstats

• r-rcpp

Required By

• bioconductor-profileplyr

• hitea

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-enrichedheatmap

and update with:

conda update bioconductor-enrichedheatmap

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-enrichedheatmap:<tag>

(see bioconductor-enrichedheatmap/tags for valid values for <tag>)

Download stats

Link to this page

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