recipe bioconductor-epistack

Heatmaps of Stack Profiles from Epigenetic Signals

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/epistack.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-epistack/meta.yaml

The epistack package main objective is the visualizations of stacks of genomic tracks (such as, but not restricted to, ChIP-seq, ATAC-seq, DNA methyation or genomic conservation data) centered at genomic regions of interest.

package bioconductor-epistack

Versions:

1.4.0-0,  1.0.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-plotrix

• r-viridislite

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-epistack

and update with:

conda update bioconductor-epistack

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-epistack:<tag>

(see bioconductor-epistack/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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