recipe bioconductor-epivizrchart

R interface to epiviz web components






This package provides an API for interactive visualization of genomic data using epiviz web components. Objects in R/BioConductor can be used to generate interactive R markdown/notebook documents or can be visualized in the R Studio's default viewer.

package bioconductor-epivizrchart

(downloads) docker_bioconductor-epivizrchart



depends bioconductor-biocgenerics:


depends bioconductor-epivizrdata:


depends bioconductor-epivizrserver:


depends r-base:


depends r-htmltools:

depends r-rjson:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-epivizrchart

and update with::

   mamba update bioconductor-epivizrchart

To create a new environment, run:

mamba create --name myenvname bioconductor-epivizrchart

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-epivizrchart/tags`_ for valid values for ``<tag>``)

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