recipe bioconductor-epivizrserver

WebSocket server infrastructure for epivizr apps and packages

Homepage:

https://bioconductor.org/packages/3.20/bioc/html/epivizrServer.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-epivizrserver/meta.yaml

Links:

biotools: epivizrserver, doi: 10.1038/nmeth.3252

This package provides objects to manage WebSocket connections to epiviz apps. Other epivizr package use this infrastructure.

package bioconductor-epivizrserver

(downloads) docker_bioconductor-epivizrserver

versions:
1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0, 

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.1-0,  1.6.0-0

depends r-base:

>=4.4,<4.5.0a0

depends r-httpuv:

>=1.3.0

depends r-mime:

>=0.2

depends r-r6:

>=2.0.0

depends r-rjson:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-epivizrserver

and update with::

   mamba update bioconductor-epivizrserver

To create a new environment, run:

mamba create --name myenvname bioconductor-epivizrserver

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-epivizrserver:<tag>

(see `bioconductor-epivizrserver/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-epivizrserver/README.html)