recipe bioconductor-extrachips

Additional functions for working with ChIP-Seq data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/extraChIPs.html

License:

GPL-3

Recipe:

/bioconductor-extrachips/meta.yaml

This package builds on existing tools and adds some simple but extremely useful capabilities for working with ChIP-Seq data. The focus is on detecting differential binding windows/regions. One set of functions focusses on set-operations retaining mcols for GRanges objects, whilst another group of functions are to aid visualisation of results. Coercion to tibble objects is also included.

package bioconductor-extrachips

(downloads) docker_bioconductor-extrachips

Versions:

1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-extrachips

and update with:

conda update bioconductor-extrachips

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-extrachips:<tag>

(see bioconductor-extrachips/tags for valid values for <tag>)

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