recipe bioconductor-faahko

Positive ionization mode data in NetCDF file format. Centroided subset from 200-600 m/z and 2500-4500 seconds. Data originally reported in “Assignment of Endogenous Substrates to Enzymes by Global Metabolite Profiling” Biochemistry; 2004; 43(45). Also includes detected peaks in an xcmsSet.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/faahKO.html

License

LGPL

Recipe

/bioconductor-faahko/meta.yaml

package bioconductor-faahko

Versions

1.22.0-0, 1.18.0-0

Depends

• bioconductor-xcms >=3.4.0,<3.5.0

• r-base >=3.5.1,<3.5.2.0a0

• wget

Required By

• bioconductor-cosmiq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-faahko

and update with:

conda update bioconductor-faahko

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-faahko:<tag>

(see bioconductor-faahko/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-faahko/README.html)