recipe bioconductor-fastliquidassociation

functions for genome-wide application of Liquid Association

Homepage

https://bioconductor.org/packages/3.14/bioc/html/fastLiquidAssociation.html

License

GPL-2

Recipe

/bioconductor-fastliquidassociation/meta.yaml

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

package bioconductor-fastliquidassociation

Versions

1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends

• bioconductor-impute >=1.68.0,<1.69.0

• bioconductor-liquidassociation >=1.48.0,<1.49.0

• bioconductor-preprocesscore >=1.56.0,<1.57.0

• r-base >=4.1,<4.2.0a0

• r-doparallel

• r-hmisc

• r-wgcna

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-fastliquidassociation

and update with:

conda update bioconductor-fastliquidassociation

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fastliquidassociation:<tag>

(see bioconductor-fastliquidassociation/tags for valid values for <tag>)

Download stats

Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-fastliquidassociation/README.html)