recipe bioconductor-fcoex

FCBF-based Co-Expression Networks for Single Cells

Homepage

https://bioconductor.org/packages/3.10/bioc/html/fcoex.html

License

GPL-3

Recipe

/bioconductor-fcoex/meta.yaml

The fcoex package implements an easy-to use interface to co-expression analysisbased on the FCBF (Fast Correlation-Based Filter) algorithm. it was implemented especifically to deal with single-cell data. The modules found can be used to redefine cell populations, unrevel novel gene associations and predict gene function by guilt-by-association. The package structure is based on the CEMiTool package.

package bioconductor-fcoex

(downloads) docker_bioconductor-fcoex

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-fcoex

and update with:

conda update bioconductor-fcoex

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fcoex:<tag>

(see bioconductor-fcoex/tags for valid values for <tag>)