recipe bioconductor-fgsea

Fast Gene Set Enrichment Analysis

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/fgsea.html

License:

MIT + file LICENCE

Recipe:

/bioconductor-fgsea/meta.yaml

Links:

biotools: fgsea, doi: 10.1101/060012

The package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which allows to use accurate stantard approaches to multiple hypothesis correction.

package bioconductor-fgsea

(downloads) docker_bioconductor-fgsea

Versions:
1.24.0-01.20.0-21.20.0-11.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-0

1.24.0-01.20.0-21.20.0-11.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.10.0-01.8.0-01.6.0-01.4.0-01.2.1-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-fgsea

and update with:

conda update bioconductor-fgsea

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fgsea:<tag>

(see bioconductor-fgsea/tags for valid values for <tag>)

Download stats