recipe bioconductor-flowploidy

Analyze flow cytometer data to determine sample ploidy

Homepage

https://bioconductor.org/packages/3.11/bioc/html/flowPloidy.html

License

GPL-3

Recipe

/bioconductor-flowploidy/meta.yaml

Links

biotools: flowploidy, doi: 10.1038/nmeth.3252

Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.

package bioconductor-flowploidy

(downloads) docker_bioconductor-flowploidy

Versions

1.14.0-01.12.0-01.10.0-11.8.0-01.6.0-01.4.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowploidy

and update with:

conda update bioconductor-flowploidy

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowploidy:<tag>

(see bioconductor-flowploidy/tags for valid values for <tag>)