recipe bioconductor-frenchfish

Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections

Homepage

https://bioconductor.org/packages/3.11/bioc/html/frenchFISH.html

License

Artistic-2.0

Recipe

/bioconductor-frenchfish/meta.yaml

FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.

package bioconductor-frenchfish

(downloads) docker_bioconductor-frenchfish

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-frenchfish

and update with:

conda update bioconductor-frenchfish

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-frenchfish:<tag>

(see bioconductor-frenchfish/tags for valid values for <tag>)