recipe bioconductor-funchip

Clustering and Alignment of ChIP-Seq peaks based on their shapes

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/FunChIP.html

License:

Artistic-2.0

Recipe:

/bioconductor-funchip/meta.yaml

Links:

biotools: funchip, doi: 10.1093/bioinformatics/btx201

Preprocessing and smoothing of ChIP-Seq peaks and efficient implementation of the k-mean alignment algorithm to classify them.

package bioconductor-funchip

(downloads) docker_bioconductor-funchip

Versions:
1.24.0-01.20.0-21.20.0-11.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-0

1.24.0-01.20.0-21.20.0-11.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.8.0-01.6.0-01.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-funchip

and update with:

conda update bioconductor-funchip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-funchip:<tag>

(see bioconductor-funchip/tags for valid values for <tag>)

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