recipe bioconductor-gatefinder

Projection-based Gating Strategy Optimization for Flow and Mass Cytometry

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/GateFinder.html

License:

Artistic-2.0

Recipe:

/bioconductor-gatefinder/meta.yaml

Given a vector of cluster memberships for a cell population, identifies a sequence of gates (polygon filters on 2D scatter plots) for isolation of that cell type.

package bioconductor-gatefinder

(downloads) docker_bioconductor-gatefinder

Versions:

1.14.0-01.12.0-01.10.0-11.10.0-01.8.0-01.6.0-01.4.0-11.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gatefinder

and update with:

conda update bioconductor-gatefinder

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gatefinder:<tag>

(see bioconductor-gatefinder/tags for valid values for <tag>)

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