recipe bioconductor-gcatest

Genotype Conditional Association TEST

Homepage

https://bioconductor.org/packages/3.11/bioc/html/gcatest.html

License

GPL-3

Recipe

/bioconductor-gcatest/meta.yaml

Links

biotools: gcatest, doi: 10.1101/012682

GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait. models.

package bioconductor-gcatest

Versions

1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-0

Depends

• bioconductor-lfa >=1.18.0,<1.19.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gcatest

and update with:

conda update bioconductor-gcatest

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gcatest:<tag>

(see bioconductor-gcatest/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gcatest/README.html)