- recipe bioconductor-genebreak
Gene Break Detection
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/GeneBreak.html
- License:
GPL-2
- Recipe:
- Links:
biotools: genebreak, doi: 10.12688/f1000research.9259.1
Recurrent breakpoint gene detection on copy number aberration profiles.
- package bioconductor-genebreak¶
-
- Versions:
1.28.0-0
,1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.28.0-0
,1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-0
- Depends:
bioconductor-cghbase
>=1.58.0,<1.59.0
bioconductor-cghcall
>=2.60.0,<2.61.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-qdnaseq
>=1.34.0,<1.35.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-genebreak
and update with:
conda update bioconductor-genebreak
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-genebreak:<tag>
(see bioconductor-genebreak/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-genebreak/README.html)