bioconductor-genomeinfodb

downloads

Contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., “chr1” versus “1”), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

Home http://bioconductor.org/packages/3.4/bioc/html/GenomeInfoDb.html
Versions 1.10.3, 1.4.3, 1.6.0, 1.6.1, 1.6.3, 1.8.7
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-genomeinfodb

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genomeinfodb

and update with:

conda update bioconductor-genomeinfodb

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-genomeinfodb.