recipe bioconductor-genomeinfodbdata

Species and taxonomy ID look up tables used by GenomeInfoDb

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/GenomeInfoDbData.html

License:

Artistic-2.0

Recipe:

/bioconductor-genomeinfodbdata/meta.yaml

Files for mapping between NCBI taxonomy ID and species. Used by functions in the GenomeInfoDb package.

package bioconductor-genomeinfodbdata

Versions:

1.2.9-0,  1.2.7-2,  1.2.7-1,  1.2.7-0,  1.2.6-0,  1.2.4-2,  1.2.4-1,  1.2.4-0,  1.2.3-0, 

1.2.9-0,  1.2.7-2,  1.2.7-1,  1.2.7-0,  1.2.6-0,  1.2.4-2,  1.2.4-1,  1.2.4-0,  1.2.3-0,  1.2.2-0,  1.2.1-1,  1.2.1-0,  1.2.0-0,  1.1.0-0,  1.0.0-1,  1.0.0-0,  0.99.0-1,  0.99.0-0

Depends:

• bioconductor-data-packages >=20221102

• curl

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-multihiccompare

• bioconductor-genomeinfodb

• bioconductor-ularcirc

• r-r4cker

• bioconductor-eupathdb

• bioconductor-countsimqc

• r-cellassign

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-genomeinfodbdata

and update with:

conda update bioconductor-genomeinfodbdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-genomeinfodbdata:<tag>

(see bioconductor-genomeinfodbdata/tags for valid values for <tag>)

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