recipe bioconductor-genomeintervals

This package defines classes for representing genomic intervals and provides functions and methods for working with these. Note: The package provides the basic infrastructure for and is enhanced by the package ‘girafe’.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/genomeIntervals.html

License

Artistic-2.0

Recipe

/bioconductor-genomeintervals/meta.yaml

Links

biotools: genomeintervals, doi: 10.1038/nmeth.3252

package bioconductor-genomeintervals

(downloads) docker_bioconductor-genomeintervals

Versions

1.38.0-0, 1.36.0-0, 1.34.0-0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-genomeinfodb

>=1.18.0,<1.19.0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-s4vectors

>=0.20.0,<0.21.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-intervals

>=0.14.0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genomeintervals

and update with:

conda update bioconductor-genomeintervals

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-genomeintervals:<tag>

(see bioconductor-genomeintervals/tags for valid values for <tag>)