recipe bioconductor-genomicalignments

Representation and manipulation of short genomic alignments

Homepage

https://bioconductor.org/packages/3.11/bioc/html/GenomicAlignments.html

License

Artistic-2.0

Recipe

/bioconductor-genomicalignments/meta.yaml

Links

biotools: genomicalignments

Provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

package bioconductor-genomicalignments

(downloads) docker_bioconductor-genomicalignments

Versions
1.24.0-01.22.0-01.20.1-01.20.0-01.18.1-01.18.0-01.16.0-01.14.1-01.14.0-0

1.24.0-01.22.0-01.20.1-01.20.0-01.18.1-01.18.0-01.16.0-01.14.1-01.14.0-01.12.2-01.10.0-01.8.4-01.6.3-11.6.3-01.6.1-01.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genomicalignments

and update with:

conda update bioconductor-genomicalignments

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-genomicalignments:<tag>

(see bioconductor-genomicalignments/tags for valid values for <tag>)