recipe bioconductor-genomicdistributions

Produces Summaries and Plots of Features Distributed Across Genomes

Homepage

https://bioconductor.org/packages/3.13/bioc/html/GenomicDistributions.html

License

BSD_2_clause + file LICENSE

Recipe

/bioconductor-genomicdistributions/meta.yaml

If you have a set of genomic ranges, this package can help you with visualization and comparison. It produces several kinds of plots, for example: Chromosome distribution plots, which visualize how your regions are distributed over chromosomes; feature distance distribution plots, which visualizes how your regions are distributed relative to a feature of interest, like Transcription Start Sites (TSSs); genomic partition plots, which visualize how your regions overlap given genomic features such as promoters, introns, exons, or intergenic regions. It also makes it easy to compare one set of ranges to another.

package bioconductor-genomicdistributions

(downloads) docker_bioconductor-genomicdistributions

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genomicdistributions

and update with:

conda update bioconductor-genomicdistributions

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-genomicdistributions:<tag>

(see bioconductor-genomicdistributions/tags for valid values for <tag>)

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