The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray data. Given the rich and varied nature of this resource, it is only natural to want to apply BioConductor tools to these data. GEOquery is the bridge between GEO and BioConductor.
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-geoquery
and update with:
conda update bioconductor-geoquery
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-geoquery.