bioconductor-geoquery

downloads

The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray data. Given the rich and varied nature of this resource, it is only natural to want to apply BioConductor tools to these data. GEOquery is the bridge between GEO and BioConductor.

Home http://bioconductor.org/packages/release/bioc/html/GEOquery.html
Versions 2.36.0, 2.38.4
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-geoquery

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-geoquery

and update with:

conda update bioconductor-geoquery

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-geoquery.