- recipe bioconductor-gispa
GISPA: Method for Gene Integrated Set Profile Analysis
- Homepage:
- License:
GPL-2
- Recipe:
GISPA is a method intended for the researchers who are interested in defining gene sets with similar, a priori specified molecular profile. GISPA method has been previously published in Nucleic Acid Research (Kowalski et al., 2016; PMID: 26826710).
- package bioconductor-gispa¶
-
- Versions:
1.22.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.0-1
,1.22.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.0-1
,1.6.0-0
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-genefilter
>=1.80.0,<1.81.0
bioconductor-gseabase
>=1.60.0,<1.61.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-gispa
and update with:
conda update bioconductor-gispa
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gispa:<tag>
(see bioconductor-gispa/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gispa/README.html)